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Fox, Charles; Tran, Neil_D; Nacion, F_Nikki; Sharlin, Samiha; Josephson, Tyler_R (, Machine Learning: Science and Technology)Abstract Symbolic regression (SR) can generate interpretable, concise expressions that fit a given dataset, allowing for more human understanding of the structure than black-box approaches. The addition of background knowledge (in the form of symbolic mathematical constraints) allows for the generation of expressions that are meaningful with respect to theory while also being consistent with data. We specifically examine the addition of constraints to traditional genetic algorithm (GA) based SR (PySR) as well as a Markov-chain Monte Carlo (MCMC) based Bayesian SR architecture (Bayesian Machine Scientist), and apply these to rediscovering adsorption equations from experimental, historical datasets. We find that, while hard constraints prevent GA and MCMC SR from searching, soft constraints can lead to improved performance both in terms of search effectiveness and model meaningfulness, with computational costs increasing by about an order of magnitude. If the constraints do not correlate well with the dataset or expected models, they can hinder the search of expressions. We find incorporating these constraints in Bayesian SR (as the Bayesian prior) is better than by modifying the fitness function in the GA.more » « less
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Bobbin, Maxwell P.; Sharlin, Samiha; Feyzishendi, Parivash; Dang, An Hong; Wraback, Catherine M.; Josephson, Tyler R. (, Digital Discovery)Interactive theorem provers are computer programs that check whether mathematical statements are correct. We show how the mathematics of theories in chemical physics can be written in the language of the Lean theorem prover, allowing chemical theory to be made even more rigorous and providing insight into the mathematics behind a theory. We use Lean to precisely define the assumptions and derivations of the Langmuir and BET theories of adsorption. We can also go further and create a network of definitions that build off of each other. This allows us to define a common basis for equations of motion or thermodynamics and derive many statements about them, like the kinematic equations of motion or gas laws such as Boyle's law. This approach could be extended beyond chemistry, and we propose the creation of a library of formally-proven theories in all fields of science. Furthermore, the rigorous logic of theorem provers complements the generative capabilities of AI models that generate code; we anticipate their integration to be valuable for automating the discovery of new scientific theories.more » « less
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